Nextflow workflow report

Workflow execution completed unsuccessfully!

The exit status of the task that caused the workflow execution to fail was: 125.

The full error message was:

Error executing process > 'NFCORE_FETCHNGS:SRA:SRA_FASTQ_FTP (DRX026011_DRR028935)'

Caused by:
  Process `NFCORE_FETCHNGS:SRA:SRA_FASTQ_FTP (DRX026011_DRR028935)` terminated with an error exit status (125)


Command executed:

  wget \
      -t 5 -nv -c -T 60 \
      -O DRX026011_DRR028935_1.fastq.gz \
      ftp.sra.ebi.ac.uk/vol1/fastq/DRR028/DRR028935/DRR028935_1.fastq.gz
  
  echo "cc01df82a9354bb6b3be93483b20c35a  DRX026011_DRR028935_1.fastq.gz" > DRX026011_DRR028935_1.fastq.gz.md5
  md5sum -c DRX026011_DRR028935_1.fastq.gz.md5
  
  wget \
      -t 5 -nv -c -T 60 \
      -O DRX026011_DRR028935_2.fastq.gz \
      ftp.sra.ebi.ac.uk/vol1/fastq/DRR028/DRR028935/DRR028935_2.fastq.gz
  
  echo "941c9998d746416dad53c94c480ddf30  DRX026011_DRR028935_2.fastq.gz" > DRX026011_DRR028935_2.fastq.gz.md5
  md5sum -c DRX026011_DRR028935_2.fastq.gz.md5
  
  cat <<-END_VERSIONS > versions.yml
  "NFCORE_FETCHNGS:SRA:SRA_FASTQ_FTP":
      wget: $(echo $(wget --version | head -n 1 | sed 's/^GNU Wget //; s/ .*$//'))
  END_VERSIONS

Command exit status:
  125

Command output:
  (empty)

Command error:
  Unable to find image 'quay.io/biocontainers/wget:1.20.1' locally
  1.20.1: Pulling from biocontainers/wget
  docker: [DEPRECATION NOTICE] Docker Image Format v1 and Docker Image manifest version 2, schema 1 support is disabled by default and will be removed in an upcoming release. Suggest the author of quay.io/biocontainers/wget:1.20.1 to upgrade the image to the OCI Format or Docker Image manifest v2, schema 2. More information at https://docs.docker.com/go/deprecated-image-specs/.
  See 'docker run --help'.

Work dir:
  /workspace/fetchngs/work/b2/38ebd1e03970a85b3fd2b03496f9f5

Tip: when you have fixed the problem you can continue the execution adding the option `-resume` to the run command line